SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 74 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37396 PIP2(18:0/18:1(11Z)) 1024.4889 11.356e-11
P37475 Ferimzone 254.1563 19.571e-12
P37481 Carpachromene dimethyl ether 364.1332 11.029e-12
P37633 1-(1,3-Benzothiazol-2-yl)-1-(2,4-dimethylphenyl)ethanol 283.1071 18.976e-13
P37706 Lycogalinoside B 692.4074 19.265e-11
P37773 No candidate annotation 532.7076 11.392e-12
P37786 (3R,1'R,5'R)-19-hydroxy-3',6'-dioxo-3-sulphato-7,8-didehydro-beta,kappa-caroten-17'-oate 706.3134 11.052e-12
P37841 No candidate annotation 609.2627 14.08e-14
P37855 Darapladib 666.2643 12.24e-11
P37876 CDP-DG(PGJ2/i-20:0) 1087.5633 11.32e-12