Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G046400

Description hypothetical protein

Gene interval Chr12:3365588–3369352 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G16090:ARI2:RING/U-box superfamily protein__AT4G34370:ARI1:RING/U-box superfamily protein__AT3G27720:ARI4:IBR domain containing protein__AT3G27710:ARI3:RING/U-box superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1 matching feature · page 1 of 1

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08000 Tyrosyl-Valine 280.1431 14.892e-17