SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G007700

Description hypothetical protein

Gene interval Chr12:563263–567108 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features57Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

57 matching features · page 2 of 6

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11712 No candidate annotation 888.3953 15.139e-11
P13935 Malvidin 3-glucoside-5-(6-acetylglucoside) 698.1805 13.505e-11
P15144 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1990 12.562e-11
P15527 (1S,4R)-passicapsin 417.1645 18.148e-11
P15974 Dihydro-3-methyl-2(3H)-furanone 100.0512 11.2e-11
P16243 Sibenadet 464.1476 12.828e-11
P17086 Isosyringalide 3'-alpha-L-rhamnopyranoside 608.2060 19.594e-11
P18937 6-octenal 126.1041 14.046e-11
P19949 4-Ethyl-2,5-dimethyloxazole 125.0837 12.427e-12
P20165 (+)-Cheimonophyllal 282.1437 15.725e-11