Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15144

Metabolite ID
P15144
Deionized mass
406.1990 Da
Average m/z
407.2051
Average RT
11.9396
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
115
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

115 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)2.177e-20
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 2Chr03:44673965–44702804 (-)2.109e-11
Glyma.04G122400 hypothetical protein NA 2Chr04:15651117–15669036 (+)5.512e-12
Glyma.05G196800 hypothetical protein NA 2Chr05:38102881–38111409 (-)5.945e-12
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)5.183e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.318e-12
Glyma.07G058300 hypothetical protein AT1G01450:AT1G01450:Protein kinase superfamily protein 2Chr07:5208488–5211264 (-)6.17e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.504e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.514e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.119e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.119e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.84e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 2Chr17:36319785–36329259 (-)2.639e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.763e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.763e-13
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)2.984e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.182e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.501e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.702e-11
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)6.105e-12
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)6.105e-12
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)1.046e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)2.475e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.234e-14
Glyma.04G122600 hypothetical protein NA 1Chr04:15763721–15773690 (-)5.512e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.946e-14
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)1.288e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)1.288e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)8.865e-12
Glyma.05G196700 hypothetical protein AT5G08660:AT5G08660:D-lactate dehydrogenase (DUF668) 1Chr05:38092324–38100286 (+)5.945e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.92e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.413e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.413e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.413e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.634e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.634e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.606e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.606e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.074e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.074e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.365e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.691e-13
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)2.701e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.504e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.504e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.504e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.504e-11
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)1.676e-12
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)1.139e-11
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)3.438e-11
Glyma.09G012200 hypothetical protein AT2G35760:AT2G35760:Uncharacterized protein family (UPF0497) 1Chr09:937048–940244 (+)2.031e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.857e-17
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)7.333e-17
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)7.009e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.049e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.954e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.953e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.953e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.954e-11
Glyma.11G105600 hypothetical protein NA 1Chr11:8021436–8024175 (+)7.792e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.726e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.726e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.726e-11
Glyma.11G173400 hypothetical protein NA 1Chr11:18867764–18869959 (+)9.475e-11
Glyma.12G007700 hypothetical protein NA 1Chr12:563263–567108 (-)2.562e-11
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)2.472e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.977e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.977e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)6.809e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)6.232e-14
Glyma.13G049200 hypothetical protein AT3G02440:TBL20:TRICHOME BIREFRINGENCE-LIKE 20 1Chr13:14515169–14519326 (-)4.317e-12
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 1Chr13:14530308–14541307 (-)4.317e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.514e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.152e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.152e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.119e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.123e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.84e-12
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)9.547e-14
Glyma.14G190300 hypothetical protein AT2G04240:XERICO:RING/U-box superfamily protein 1Chr14:45531920–45533895 (-)1.262e-11
Glyma.14G190400 hypothetical protein AT3G07650:COL9:CONSTANS-like 9 1Chr14:45536719–45544087 (-)1.262e-11
Glyma.14G193800 hypothetical protein NA 1Chr14:45860185–45866449 (+)6.623e-11
Glyma.14G198600 hypothetical protein NA 1Chr14:46360801–46362778 (+)6.333e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.146e-14
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.957e-17
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)1.909e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)3.237e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.31e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.31e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)7.527e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)2.684e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)6.063e-17
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)9.727e-14
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)3.363e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)8.972e-11
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)2.568e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)4.65e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)8.338e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.557e-11
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)6.366e-11
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)6.366e-11
Glyma.17G007400 hypothetical protein NA 1Chr17:630066–634738 (-)7.246e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.811e-14
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.811e-14
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)1.001e-14
Glyma.17G212200 hypothetical protein NA 1Chr17:35064075–35065120 (-)2.639e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)6.508e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)3.792e-13
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)4.263e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.374e-12
Glyma.18G079100 hypothetical protein NA 1Chr18:7600652–7603424 (-)6.032e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)7.193e-15
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.455e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.419e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)9.922e-13