SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G119600

Description hypothetical protein

Gene interval Chr11:9127497–9129972 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G16130:PMT2:polyol/monosaccharide transporter 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features202Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

202 matching features · page 9 of 21

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20405 3-Aminocaproic acid 131.0940 19.111e-11
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 14.738e-12
P20604 L-Asparagine 132.0552 17.389e-12
P20649 Isochamanetin 362.1091 15.871e-12
P21070 Guvacoline 141.0788 12.239e-12
P21543 3,3-Difluoro-5alpha-androstan-17beta-yl acetate 354.2378 17.929e-11
P21547 No candidate annotation 725.1200 15.24e-12
P21656 No candidate annotation 419.6725 19.196e-13
P21970 Gentianadine 149.0481 19.114e-13
P22313 Terpendole J 521.3205 14.715e-11