SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G064300

Description hypothetical protein

Gene interval Chr11:4849799–4851673 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36780:BEH2:BES1/BZR1 homolog 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0036.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1116 matching features · page 3 of 112

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00823 (-)-Mintlactone 306.0213 15.877e-15
P00829 1-Bromo-8-ketoambliol A 438.1405 14.438e-11
P00843 7H-Pyrido(1,2,3-de)-1,4-benzoxazine-6-carboxylic acid, 9-fluoro-2,3-dihydro-3-methyl-10-(4-methyl-1-piperazinyl)-7-oxo-, N-oxide 377.1387 15.6e-11
P00884 (+)-cis-5,6-Dihydro-5-hydroxy-4-methoxy-6-(2-phenylethyl)-2H-pyran-2-one 248.1059 15.328e-13
P00892 Zyzzyanone A 349.1428 12.202e-11
P00905 Metiazinic acid 271.0675 13.205e-12
P00907 Methocarbamol 241.0915 13.176e-11
P00964 Glutarimide 113.0469 12.174e-11
P01028 Lamiridosin A 260.0890 11.246e-11
P01041 No candidate annotation 482.0337 11.301e-12