SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G257500

Description hypothetical protein

Gene interval Chr10:48386988–48389180 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features99Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

99 matching features · page 7 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P36657 Rediocide C 814.3627 17.945e-12
P37725 PE(20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)/22:5(4Z,7Z,10Z,13Z,16Z)) 859.4946 19.827e-11
P37857 Dymacrin D 438.3482 16.851e-11
P37987 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1463 11.814e-12
P39149 Colubrin 940.4999 15.168e-11
P39167 No candidate annotation 366.7223 11.503e-14
P39233 Sordarin-3-carboxylic acid 508.2648 12.947e-14
P39994 Shatavarin X 928.5023 13.907e-12
P40215 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5413 12.571e-11
P40332 No candidate annotation 366.7200 11.171e-12