SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 181 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P50391 Rubescensin M 682.4118 14.249e-14
P50395 Polyoxyethylene (600) monoricinoleate 340.2952 12.313e-11
P50396 PE(14:1(9Z)/18:3(10,12,15)-OH(9)) 699.4380 11.507e-11
P50425 No candidate annotation 205.5846 12.76e-11
P50454 No candidate annotation 487.3460 19.731e-11
P50455 Carrageenan, potassium salt of 347.2545 12.367e-13
P50458 No candidate annotation 623.2453 14.944e-11
P50482 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0987 11.468e-12
P50499 Indene 116.0616 12.966e-11
P50535 (5R,6S)-5,6-Epoxy-7-megastigmen-9-one 208.1423 18.673e-11