SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 139 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37255 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3399 11.128e-11
P37286 Dehydrohernandaline 503.2028 15.906e-11
P37296 Chokol F 240.1729 13.862e-13
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 11.502e-11
P37331 Sublanceoside H6 938.4845 11.608e-11
P37333 Xanthobaccin C 494.2826 18.111e-18
P37338 Quadranoside X 650.3972 11.434e-11
P37360 2,3-Dihydroxycuparene 234.1591 15.221e-11
P37363 2-[2-(4-Methylphenyl)ethylsulfanyl]-3-[4-[2-(4-methylsulfonyloxyphenoxy)ethyl]phenyl]propanoic acid 514.1503 12.254e-11
P37368 No candidate annotation 929.4614 12.615e-11