SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 127 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P33709 UDP-L-threo-4-pentosulose 374.0967 16.915e-12
P33718 Gossypol 518.1936 16.222e-11
P33740 No candidate annotation 899.4638 18.436e-11
P33758 o-Benzoquinone 108.0203 15.497e-11
P33782 Gilvusmycin 702.2509 17.361e-11
P33822 Madecassoside 974.5082 19.955e-11
P33850 2H-Pyran-2-one 96.0201 11.022e-11
P33851 Uroporphyrin II 942.3543 19.248e-12
P33883 N-succinyl-chitosan 583.2270 11.042e-12
P33911 Streptovirudin B2 802.3915 15.993e-16