SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 125 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P33213 No candidate annotation 785.3932 11.952e-11
P33243 No candidate annotation 309.0936 14.313e-12
P33274 Estriol 3-sulfate 368.1293 11.536e-16
P33310 Ternatin C5 874.1936 11.004e-16
P33333 No candidate annotation 873.1893 14.479e-11
P33368 (3beta, 5beta)-pregn-16(17)-en-3-ol-20-one 3-O-alpha-l-arabinopyranosyl-(1-4)-beta-d-glucopyranosyl-(1-2)-beta-d-glucopyranoside 772.3798 11.303e-11
P33419 Hydroxyprolyl-Valine 230.1261 12.112e-11
P33461 Lucitanib 443.1838 14.155e-11
P33463 1-Octen-3-ol 128.1191 12.926e-12
P33471 Thelephantin E 548.1401 13.334e-11