SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G028500

Description hypothetical protein

Gene interval Chr10:2476846–2478953 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features477Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

477 matching features · page 41 of 48

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P43702 No candidate annotation 1069.0524 17.267e-11
P43814 Tetradeca-6,9,12-trienedioylcarnitine 395.2323 14.787e-12
P43927 No candidate annotation 649.4107 16.973e-11
P44158 (3-Methyl-2-butenyl)-benzene 146.1085 12.637e-11
P44419 Lanceolitol B7 636.4120 11.177e-12
P44718 Candicanoside A 720.4087 12.768e-11
P44756 Methyl (2E)-2-(10,13-dimethyl-11-oxo-3-pyrrolidin-1-yl-2,7,8,9,12,14,15,16-octahydro-1H-cyclopenta[a]phenanthren-17-ylidene)acetate 409.2568 17.034e-11
P44811 Fargoside D 778.4074 13.011e-11
P44888 Valylvaline 216.1489 13.62e-11
P44943 Asparagoside C 740.4321 12.385e-11