SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G282900

Description hypothetical protein

Gene interval Chr09:49863377–49871270 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1811Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records591

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.3263.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1811 matching features · page 14 of 182

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11617 No candidate annotation 209.1463 25.595e-13
P11790 No candidate annotation 136.0860 21.94e-11
P11794 Okaramine A 520.2462 22.144e-16
P12066 Sildenafil 474.2105 23.242e-13
P12106 Coumanolignan 318.1226 23.233e-14
P12127 Paulomycin F 702.1925 21.089e-18
P12129 No candidate annotation 408.9855 22.106e-15
P12164 Guvacoline 141.0781 23.281e-12
P12304 Amrubicin 483.1476 21.928e-13
P12368 p-Hydroxyphenylacetylglycine 209.0666 27.661e-14