SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G282900

Description hypothetical protein

Gene interval Chr09:49863377–49871270 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features1811Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records591

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.3263.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1811 matching features · page 13 of 182

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11080 Grapiprant 491.2006 21.023e-12
P11088 8-trans-[2-(6-Benzoyloxy-4-hydroxy-2-methoxy-3-methylphenyl)ethenyl]-5-methoxyflavan-7-ol 538.2015 29.381e-12
P11101 L-beta-aspartyl-L-phenylalanine 280.1044 26.836e-15
P11169 Benthiavalicarb isopropyl 381.1532 28.31e-15
P11244 Maculalactone K 532.1815 28.563e-14
P11263 Psilostachyin C 264.1332 25.242e-15
P11278 27-O-Demethylrifamycin SV 683.3041 25.265e-17
P11442 Bunazosin 373.2181 24.966e-14
P11463 5-Megastigmen-7-yne-3,9-diol 9-glucoside 370.1959 27.745e-14
P11526 (-)-2,3-Dihydrocitromycetin 292.0562 21.888e-12