SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G276300

Alias WNK10

Description Not annotated

Gene interval Chr09:49161113–49166087 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G51630:WNK5:with no lysine (K) kinase 5

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features430Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0023.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

430 matching features · page 34 of 43

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37474 (22R)-3beta,14,25-trihydroxy-6-oxo-5beta-cholest-7-en-22-yl dihydrogen phosphate 528.2870 13.37e-11
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 12.512e-12
P37713 Roxindole 346.2089 19.772e-11
P37731 2alpha,3alpha-(Difluoromethylene)-5alpha-androstan-17beta-ol acetate 366.2344 11.347e-11
P37738 Taxuspine A 728.3220 12.204e-13
P37802 No candidate annotation 837.4029 11.593e-12
P37887 Starch acetate 306.0940 19.275e-11
P37943 GW 1929 495.2194 12.035e-11
P38169 (2E,4E)-5-[2-Methyl-2-(1,1,4,4-tetramethyl-1,2,3,4-tetrahydronaphthalene-6-yl)cyclopropyl]-3-methyl-2,4-pentadienoic acid 352.2458 17.931e-11
P38229 No candidate annotation 711.8357 12.054e-11