SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.09G276100

Description hypothetical protein

Gene interval Chr09:49139110–49143810 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G38510:AT2G38510:MATE efflux family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features606Overlap

Maximum supporting SNP records2

Features with ≥2 supporting SNP records606

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

AT2G38510NCBI Gene ↗UniProt ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

606 matching features · page 5 of 61

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P04521	6-Acetamido-3-oxohexanoate	187.0828	2	6.814e-13
P04560	17-dimethylarsinoyl-9Z-heptadecenoic acid	388.1968	2	1.279e-12
P04584	2-Methylacetoacetic acid	116.0478	2	2.596e-16
P04642	Aminoacylase	536.2172	2	6.819e-11
P04841	4-Aminophenylacetic acid	151.0611	2	1.119e-13
P04848	Nitrobenzene	123.0319	2	2.561e-11
P05035	No candidate annotation	350.0293	2	1.262e-13
P05051	Lenalidomide	259.0953	2	9.316e-11
P05139	No candidate annotation	310.6259	2	2.362e-11
P05287	6-Hydroxymethyl-7,8-dihydropterin diphosphate	355.0086	2	2.609e-12