SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G253900

Description hypothetical protein

Gene interval Chr09:47359742–47364806 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features700Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

700 matching features · page 8 of 70

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05786 Desulfoglucotropeolin 329.0957 12.682e-11
P05821 Pandangolide 3 362.1408 11.238e-11
P05861 Ethenodeoxyadenosine 275.1027 12.65e-12
P05900 [1R-(1alpha,4alpha,4aalpha,7beta,8abeta)]-4-Bromo-7-chlorodecahydro-1,4a-dimethyl-7-(1-methylethyl)-1-naphthalenol 336.0899 14.742e-13
P06045 (-)-Neoacrimarine-J 517.1327 19.24e-11
P06049 Indol-3-ylacetyl-myo-inositol L-arabinoside 469.1558 11.513e-11
P06146 4-Formylsalicylic acid 166.0251 13.738e-14
P06240 Aminochrome o-semiquinone 150.0569 12.225e-11
P06370 No candidate annotation 597.1396 17.488e-11
P06391 (S)-2,3-Dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 5-[glucosyl-(1->4)-b-D-glucoside] 547.1545 17.42e-12