Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P06370

Metabolite ID
P06370
Deionized mass
597.1396 Da
Average m/z
598.1456
Average RT
9.0106
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)7.72e-13
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)5.619e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)3.606e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.799e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.652e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)4.449e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.056e-15
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)5.924e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.626e-15
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.361e-14
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.215e-14
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.215e-14
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.215e-14
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.215e-14
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.215e-14
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.215e-14
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.215e-14
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)7.72e-13
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)1.361e-11
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 1Chr02:40998557–41001678 (-)8.419e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.115e-13
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)5.295e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.438e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.23e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.229e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.029e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.651e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.651e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.651e-13
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)8.161e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.128e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.574e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.932e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.753e-22
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.167e-13
Glyma.05G239000 hypothetical protein NA 1Chr05:41489721–41491777 (+)8.237e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.752e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.402e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.402e-12
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.606e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.799e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.799e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.799e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.799e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)9.283e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)9.283e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.336e-12
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.149e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)7.488e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)7.488e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.092e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.092e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)3.565e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.3e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.835e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.835e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.835e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.073e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.911e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.652e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.134e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.542e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.134e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.134e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.212e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)7.238e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.458e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.982e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)5.639e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.723e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.479e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.479e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.95e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.95e-12
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)3.102e-11