SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G253800

Description hypothetical protein

Gene interval Chr09:47356240–47357763 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features699Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

699 matching features · page 13 of 70

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09434 2-(3,4-Dihydro-2,2-dimethyl-6-nitro-2H-1,4-benzoxazin-4-yl)pyridine N-oxide 301.1057 16.791e-12
P09780 Isochromophilone IX 475.1686 13.463e-11
P09786 2-Methylthioribosyl-trans-zeatin 397.1378 13.793e-14
P09819 No candidate annotation 250.1263 18.597e-11
P09874 No candidate annotation 199.0545 11.903e-12
P09910 Coronarian 382.0868 19.907e-11
P10110 No candidate annotation 88.0310 15.417e-12
P10183 Convergence 439.0967 17.767e-13
P10274 2'-Methyl-4'-(5-methyl-(1,2,4)-oxadiazol-3-yl)biphenyl-4-carboxylic acid (4-methoxy-3-(4-methylpiperazin-1-yl)phenyl)amide 497.2424 19.8e-13
P10294 No candidate annotation 396.0641 12.488e-14