SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G250000

Description hypothetical protein

Gene interval Chr09:47096937–47099390 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features443Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records21

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0474.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

443 matching features · page 26 of 45

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29314 No candidate annotation 252.1318 16.51e-11
P29564 [R-(E)]-4-(4-Methyl-3-cyclohexen-1-yl)-3-penten-2-one 178.1340 11.234e-12
P29622 No candidate annotation 871.4438 16.92e-12
P30000 N-(1-methyl-2-hydroxy-2-phenyl-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 437.3308 11.557e-11
P30177 Manshuritine 693.3160 14.935e-11
P30224 2alpha,3alpha,4beta,15,16-Pentahydroxy-ent-cleroda-13Z-ene 356.2536 12.966e-11
P30228 Cladiellisin 320.2327 11.755e-11
P30328 5R-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-2-henanone 246.1473 15.05e-14
P30440 2-Isopropylfuran 110.0717 11.016e-11
P30474 Hosloppin 392.0960 15.721e-11