SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G250000

Description hypothetical protein

Gene interval Chr09:47096937–47099390 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features443Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records21

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0474.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

443 matching features · page 23 of 45

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25495 Phylloflavan 498.1527 17.276e-11
P25637 trans-p-Ferulyl alcohol 4-O-[6-(2-methyl-3-hydroxypropionyl)] glucopyranoside 428.1667 11.614e-12
P25647 Crooksiine 640.2895 14.532e-12
P25785 Clemastine 343.1718 13.699e-11
P25827 Istamycin AO 337.1832 11.577e-13
P25900 No candidate annotation 924.3381 19.163e-11
P26326 No candidate annotation 277.6307 15.55e-11
P26341 No candidate annotation 337.6639 11.939e-12
P26346 D-Glucose, 2-deoxy-2-[[(methylnitrosoamino)carbonyl]amino]- 265.0911 12.289e-11
P26363 Indoxyl glucuronide 309.0910 12.043e-12