SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G250000

Description hypothetical protein

Gene interval Chr09:47096937–47099390 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features443Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records21

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0474.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

443 matching features · page 2 of 45

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P33257 2,5-Diisopropyl-3-methylphenol 192.1493 22.31e-11
P33739 eribaxaban 484.1283 23.268e-11
P34885 Periclymenoside 728.2633 22.158e-12
P34991 4-Formylsalicylic acid 166.0256 24.833e-12
P36841 5,2'-Dihydroxy-6,7,8,6'-tetramethoxyflavanone 376.1166 23.218e-13
P38617 No candidate annotation 542.7330 21.086e-11
P39126 Fruticosonine 312.2196 23.585e-17
P41501 Tuberactinomycin O 669.3316 22.455e-14
P43463 PGP(18:1(9Z)/20:4(6E,8Z,11Z,13E)-2OH(5S,15S)) 908.4845 21.082e-11
P51040 No candidate annotation 364.2773 21.953e-13