Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34885

Metabolite ID
P34885
Deionized mass
728.2633 Da
Average m/z
729.2749
Average RT
17.5643
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 5Chr08:11525692–11536927 (+)2.046e-12
Glyma.18G195500 hypothetical protein NA 3Chr18:46967195–46981775 (+)4.457e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)8.802e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)2.322e-11
Glyma.09G250000 hypothetical protein NA 2Chr09:47096937–47099390 (-)2.158e-12
Glyma.15G124200 hypothetical protein AT1G50500:HIT1:Membrane trafficking VPS53 family protein 2Chr15:9861709–9873220 (+)6.759e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)7.458e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)8.802e-12
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)1.403e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)3.663e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.04e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)3.359e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)3.359e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)3.359e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)5.488e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)9.12e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)9.12e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)9.12e-11
Glyma.06G179200 hypothetical protein NA 1Chr06:15217419–15223877 (-)3.441e-11
Glyma.06G184100 hypothetical protein NA 1Chr06:15897746–15902462 (+)1.072e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.706e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)6.117e-11
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)3.786e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.083e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.525e-13
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)3.528e-12
Glyma.09G249800 hypothetical protein AT3G47390:PHS1:cytidine/deoxycytidylate deaminase family protein 1Chr09:47082637–47087385 (-)9.386e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.079e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.079e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.079e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.079e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.145e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.585e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.511e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.511e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.512e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.256e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.256e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.101e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)7.493e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)8.871e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.097e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.949e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.097e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.097e-15
Glyma.15G124300 hypothetical protein NA 1Chr15:9875069–9875810 (+)9.432e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)8.682e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)5.72e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)7.458e-12
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)7.07e-14
Glyma.18G195900 accA-2 AT2G38040:CAC3:acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit 1Chr18:47054765–47060075 (+)4.457e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 1Chr18:47102746–47129707 (+)6.568e-13
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)5.078e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.068e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.068e-12