SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G062900

Description hypothetical protein

Gene interval Chr09:6004419–6011041 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features548Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

548 matching features · page 47 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46821 3-Hydroxy-2-methylglutaric acid 162.0521 12.818e-11
P46842 Aypgkf 681.3415 12.45e-12
P46909 Racemoside B 886.4934 19.201e-11
P46924 4,4'-Diapophytofluene 406.3552 12.188e-11
P46936 1-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-2-(6Z,9Z,12Z,15Z-octadecatetraenoyl)-glycero-3-phospho-(1'-myo-inositol) 876.4780 11.285e-12
P47127 (9Z,11E,13Z)-Octadeca-9,11,13-trienoylcarnitine 421.3172 11.664e-11
P47185 Dibucaine 343.2220 13.18e-14
P47188 Trihexosylceramide (d18:1/12:0) 967.5988 14.122e-12
P47544 Ancorinoside C 861.4698 12.227e-12
P47691 No candidate annotation 293.6326 12.886e-11