SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G060000

Description hypothetical protein

Gene interval Chr09:5548206–5554279 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features68Overlap
Maximum supporting SNP records7
Features with ≥2 supporting SNP records68

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4706.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

68 matching features · page 5 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31621 No candidate annotation 820.2727 29.468e-12
P32073 Tibouchinin 800.2208 25.873e-11
P33310 Ternatin C5 874.1936 28.175e-11
P34323 1-Hydroxypropan-2-yl 2-isopropyl-5-methylcyclohexyl carbonate 258.1842 21.938e-11
P36700 4,8-Dimethyl-3E,8E-decadien-10-olide 194.1283 21.236e-15
P38582 12-hydroxy-3Z,6Z-dodecadienoic acid 212.1412 24.385e-11
P39839 No candidate annotation 223.1261 21.199e-11
P41169 4-Ethyl-5-methyl-2-pentyloxazol 181.1443 24.927e-13
P41319 Veralosine 617.3970 21.051e-11
P41393 1-Mannosyloxy-3,4-didehydro-1,2-dihydro-8'-apo-psi-caroten-8'-ol 596.3702 21.673e-12