SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G060000

Description hypothetical protein

Gene interval Chr09:5548206–5554279 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features68Overlap
Maximum supporting SNP records7
Features with ≥2 supporting SNP records68

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4706.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

68 matching features · page 3 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12066 Sildenafil 474.2105 22.905e-12
P13948 O-Desmethyl Gefitinib 432.1359 24.035e-11
P14462 Rostratin C 484.0975 23.436e-11
P14825 9R-hydroxy-2E,4E-decadienoic acid 184.1086 26.866e-11
P14850 N-(E-4-coumaroyl)-aspartate 279.0736 24.398e-11
P15566 1-(2,4,6-Trimethylphenoxy)propan-2-amine 193.1459 28.551e-11
P19115 Israpafant 488.1842 23.482e-12
P19965 Acyclovir monophosphate 305.0475 26.668e-12
P21337 3-(9-Adeninyl)propionic acid. 207.0794 22.967e-11
P22578 No candidate annotation 583.1306 21.823e-11