SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 96 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31215 No candidate annotation 966.3363 18.885e-12
P31222 Sufotidine 421.2096 12.705e-12
P31235 Ethambutol 204.1849 12.364e-11
P31327 Aurantiomide A 372.1794 19.834e-13
P31330 Arginine chloride 192.0780 14.552e-11
P31335 Parvifolidone A 480.2142 17.148e-11
P31342 N-Methyl-N-nitroso-1H-purin-6-amine 178.0605 19.273e-12
P31398 Eutreptiellanone 562.3807 17.085e-13
P31421 Flumezapine 330.1305 18.493e-13
P31486 Mangostenone B 462.2048 11.252e-11