P31486
Metabolite ID
P31486
Deionized mass
462.2048 Da
Average m/z
463.2128
Average RT
16.3590
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
115
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
115 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 2.332e-11 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 3 | Chr03:169480–172727 (+) | 6.186e-12 | |
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 5.058e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 3 | Chr06:50191600–50203098 (-) | 2.173e-12 | |
| Glyma.16G114900 | hypothetical protein | NA | 3 | Chr16:25456379–25485759 (+) | 9.576e-12 | |
| Glyma.02G200700 | hypothetical protein | AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein | 2 | Chr02:38435454–38459254 (-) | 5.686e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 2.556e-15 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 1.616e-12 | |
| Glyma.15G140400 | hypothetical protein | NA | 2 | Chr15:11495189–11495691 (+) | 1.814e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 2.528e-13 | |
| Glyma.16G146700 | hypothetical protein | NA | 2 | Chr16:30755899–30759360 (-) | 2.638e-13 | |
| Glyma.18G100200 | hypothetical protein | NA | 2 | Chr18:10512806–10522231 (+) | 5.354e-13 | |
| Glyma.18G106600 | hypothetical protein | NA | 2 | Chr18:11947553–11951868 (+) | 7.204e-12 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 2.332e-11 | |
| Glyma.02G006500 | hypothetical protein | AT4G01660:ABC1:ABC transporter 1 | 1 | Chr02:693193–700260 (+) | 6.774e-11 | |
| Glyma.02G044600 | hypothetical protein | NA | 1 | Chr02:4131829–4134877 (+) | 6.607e-12 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 4.75e-11 | |
| Glyma.02G200600 | hypothetical protein | AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 | 1 | Chr02:38432334–38436063 (+) | 5.686e-11 | |
| Glyma.02G201100 | hypothetical protein | AT5G06200:CASP4:Uncharacterized protein family (UPF0497) | 1 | Chr02:38497390–38499369 (-) | 5.686e-11 | |
| Glyma.02G201400 | hypothetical protein | AT5G06140:SNX1:sorting nexin 1 | 1 | Chr02:38539394–38547251 (+) | 5.686e-11 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 1 | Chr02:38993365–39000790 (+) | 2.667e-14 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 4.092e-12 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 4.81e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 1.13e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 2.186e-15 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 9.983e-11 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 6.579e-11 | |
| Glyma.04G104400 | hypothetical protein | NA | 1 | Chr04:9885009–9889282 (+) | 7.021e-11 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 1.66e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 7.726e-12 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 1.609e-11 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 1.609e-11 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 1.609e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 8.459e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 8.46e-11 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 1.05e-12 | |
| Glyma.06G303700 | hypothetical protein | AT1G05230:HDG2:homeodomain GLABROUS 2 | 1 | Chr06:49315918–49324382 (+) | 9.417e-11 | |
| Glyma.06G303800 | hypothetical protein | AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative | 1 | Chr06:49328417–49330906 (-) | 9.417e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 5.058e-11 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 5.058e-11 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 1.272e-11 | |
| Glyma.06G316500 | hypothetical protein | AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein | 1 | Chr06:50531222–50538652 (-) | 8.776e-11 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 1 | Chr07:1697119–1698666 (+) | 4.53e-11 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 9.825e-11 |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.391e-13 | |
| Glyma.08G122200 | hypothetical protein | NA | 1 | Chr08:9416766–9429995 (-) | 6.096e-11 | |
| Glyma.08G122600 | hypothetical protein | NA | 1 | Chr08:9445153–9450502 (+) | 6.096e-11 | |
| Glyma.08G123500 | hypothetical protein | NA | 1 | Chr08:9494946–9505931 (-) | 1.511e-13 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 8.393e-11 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 1.252e-11 | |
| Glyma.09G060600 | hypothetical protein | AT3G28430:AT3G28430:CLEC16A-like protein | 1 | Chr09:5661672–5675338 (-) | 8.715e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 4.987e-11 | |
| Glyma.09G275500 | hypothetical protein | NA | 1 | Chr09:49105837–49106989 (+) | 2.684e-14 | |
| Glyma.11G095100 | hypothetical protein | NA | 1 | Chr11:7212438–7214276 (-) | 6.485e-13 | |
| Glyma.11G117500 | hypothetical protein | NA | 1 | Chr11:8932743–8933846 (-) | 3.221e-11 | |
| Glyma.11G118200 | hypothetical protein | NA | 1 | Chr11:8979431–8983783 (+) | 2.595e-11 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 1.554e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 1.554e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 1.554e-11 | |
| Glyma.12G049300 | hypothetical protein | NA | 1 | Chr12:3538428–3539170 (-) | 6.021e-11 | |
| Glyma.12G054500 | hypothetical protein | NA | 1 | Chr12:3938604–3943724 (+) | 1.476e-11 | |
| Glyma.12G054700 | hypothetical protein | AT3G45140:LOX2:lipoxygenase 2 | 1 | Chr12:3949453–3957386 (-) | 2.829e-12 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 3.735e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 6.367e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 6.367e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 4.218e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 8.299e-12 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 8.921e-17 | |
| Glyma.14G071600 | hypothetical protein | AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein | 1 | Chr14:6016839–6019954 (+) | 2.176e-11 | |
| Glyma.14G071700 | hypothetical protein | AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 | 1 | Chr14:6037810–6041899 (+) | 1.502e-11 | |
| Glyma.14G071800 | hypothetical protein | NA | 1 | Chr14:6040746–6041899 (-) | 1.502e-11 | |
| Glyma.14G072200 | Ipk1 | AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… | 1 | Chr14:6059598–6063755 (-) | 3.999e-11 | |
| Glyma.14G077100 | hypothetical protein | AT5G42610:AT5G42610:calcium uniporter (DUF607) | 1 | Chr14:6486139–6488935 (+) | 2.111e-11 | |
| Glyma.14G077200 | hypothetical protein | AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein | 1 | Chr14:6498564–6506068 (+) | 2.111e-11 | |
| Glyma.14G077300 | hypothetical protein | AT1G75040:PR5:pathosis-related protein 5 | 1 | Chr14:6508609–6520744 (-) | 2.111e-11 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 1.616e-12 | |
| Glyma.14G202400 | hypothetical protein | AT1G21480:AT1G21480:Exostosin family protein | 1 | Chr14:46768802–46772377 (+) | 3.58e-11 | |
| Glyma.14G202500 | hypothetical protein | NA | 1 | Chr14:46773824–46775761 (+) | 8.786e-12 | |
| Glyma.14G204400 | hypothetical protein | AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 | 1 | Chr14:46936057–46943868 (-) | 4.301e-13 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 3.622e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 5.219e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 3.622e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 3.622e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 5.383e-14 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 5.432e-15 | |
| Glyma.15G141100 | hypothetical protein | NA | 1 | Chr15:11554310–11555089 (+) | 3.28e-14 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 1.175e-11 |
| Glyma.16G115300 | hypothetical protein | NA | 1 | Chr16:25584135–25585667 (+) | 9.577e-12 | |
| Glyma.16G115400 | hypothetical protein | NA | 1 | Chr16:25604547–25606360 (+) | 9.577e-12 | |
| Glyma.16G115500 | hypothetical protein | NA | 1 | Chr16:25622503–25630816 (+) | 9.577e-12 | |
| Glyma.16G115600 | hypothetical protein | AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr16:25661245–25664376 (-) | 9.577e-12 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 3.917e-13 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 2.748e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 1.215e-13 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 2.541e-11 | |
| Glyma.16G139100 | hypothetical protein | NA | 1 | Chr16:29632332–29634248 (-) | 1.699e-12 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 1 | Chr16:30514629–30519598 (+) | 8.825e-11 | |
| Glyma.16G146300 | hypothetical protein | NA | 1 | Chr16:30714315–30716624 (+) | 2.638e-13 | |
| Glyma.17G251300 | hypothetical protein | AT1G19520:NFD5:pentatricopeptide (PPR) repeat-containing protein | 1 | Chr17:40609523–40612369 (+) | 9.933e-11 | |
| Glyma.17G251800 | hypothetical protein | NA | 1 | Chr17:40633579–40636068 (+) | 5.712e-14 | |
| Glyma.17G251900 | hypothetical protein | AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein | 1 | Chr17:40641019–40644794 (+) | 5.712e-14 | |
| Glyma.18G098900 | hypothetical protein | NA | 1 | Chr18:10297476–10305043 (+) | 1.725e-12 | |
| Glyma.18G099000 | hypothetical protein | AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein | 1 | Chr18:10326925–10347143 (-) | 1.725e-12 | |
| Glyma.18G099600 | hypothetical protein | AT4G27040:VPS22:EAP30/Vps36 family protein | 1 | Chr18:10453308–10458891 (-) | 2.399e-11 | |
| Glyma.18G099700 | hypothetical protein | AT5G54860:AT5G54860:Major facilitator superfamily protein | 1 | Chr18:10459970–10464888 (-) | 1.605e-11 | |
| Glyma.18G099900 | hypothetical protein | AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… | 1 | Chr18:10471443–10475076 (+) | 2.399e-11 | |
| Glyma.18G100300 | hypothetical protein | NA | 1 | Chr18:10523838–10534676 (+) | 6.851e-13 | |
| Glyma.18G106700 | hypothetical protein | NA | 1 | Chr18:11956201–11957138 (-) | 6.282e-11 | |
| Glyma.18G106800 | hypothetical protein | AT2G42880:MPK20:MAP kinase 20 | 1 | Chr18:11959920–11966545 (-) | 6.282e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 2.338e-11 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 4.407e-11 | |
| Glyma.19G005800 | Polyribonucleotide nucleotidyltransferase 2, mitochondrial | AT5G14580:AT5G14580:polyribonucleotide nucleotidyltransferase | 1 | Chr19:522587–531382 (-) | 1.531e-11 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 6.68e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 3.484e-14 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 3.484e-14 |