SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 95 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30802 FR 900490 370.1602 14.15e-12
P30814 Isopongaflavone 334.1217 12.947e-11
P30831 Hedyotisol A 810.3045 16.891e-11
P30880 9-Bromo-17beta-hydroxy-17-methylandrost-4-ene-3,11-dione 394.1153 13.193e-12
P30900 Triptersinine L 631.2720 14.505e-11
P30903 No candidate annotation 373.3143 12.642e-11
P30962 Spongothymidine 258.0832 19.545e-12
P31031 2-Acetylpyridine 121.0523 12.454e-11
P31043 Guadecitabine 557.1480 11.33e-16
P31137 No candidate annotation 898.3643 12.518e-11