SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 70 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22455 Nocloprost 400.2416 11.267e-11
P22485 No candidate annotation 593.8824 11.151e-11
P22504 Swietenidin B 205.0736 17.659e-11
P22528 Adiposin 2 661.2467 16.007e-12
P22578 No candidate annotation 583.1306 14.31e-13
P22588 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0666 11.676e-12
P22595 Mucronulatol-(4->5')-vestitol 572.1981 14.967e-11
P22618 (Z)-3-Hexenyl 3-methylbutanoate 184.1453 16.319e-11
P22625 3-Methyldecanoyl-CoA 935.2702 12.212e-11
P22790 No candidate annotation 123.0747 11.941e-14