SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 65 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20649 Isochamanetin 362.1091 13.644e-11
P20702 2-(Methylenebutyl)-cyclopropane 110.1086 19.728e-12
P20719 N-Phenylacetylglutamic acid 265.0944 17.989e-13
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 11.495e-11
P20828 Pimethixene 293.1245 13.875e-11
P20846 Draflazine 603.1909 11.978e-12
P20905 No candidate annotation 787.3606 18.003e-13
P20928 Hydroxydesmthyl doxepin glucuronide 471.1885 11.195e-11
P20973 SB 243213 428.1449 11.212e-12
P21004 No candidate annotation 631.2820 18.988e-12