SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 32 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07366 O-Phospho-L-serine 185.0125 13.603e-11
P07423 2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid 340.1235 15.35e-13
P07483 Phomonitroester 239.0800 11.461e-11
P07500 Diaveridine 260.1291 11.949e-11
P07606 N1-Hydroxy-roquefortine C 405.1799 16.231e-12
P07608 p-Hydroxyphenylacetylglycine 209.0701 16.115e-12
P07617 Nitrogen mustard 155.0286 19.59e-11
P07726 Tolmetin glucuronide 433.1375 11.043e-11
P07768 (S)-3-[(Cyanophenylmethyl)amino]-3-oxopropanoic acid 218.0690 12.319e-11
P07827 No candidate annotation 809.2516 11.684e-12