SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 3 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08431 (6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide phosphate 763.1053 21.101e-11
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 22.43e-13
P10651 2,6-Diamino-9-(2-hydroxyethoxymethyl)purine 224.1015 23.873e-12
P11215 7-Hydroxycymopochromenol 340.0681 22.473e-11
P11527 S-(2-Chloroethyl)glutathione 369.0774 23.35e-12
P12066 Sildenafil 474.2105 26.957e-13
P12116 o-Methylacetophenone 134.0716 24.406e-12
P12959 Azocyclotin 437.1846 23.47e-11
P13391 1-(Indol-3-yl)propanol 3-phosphate 255.0623 23.434e-13
P13935 Malvidin 3-glucoside-5-(6-acetylglucoside) 698.1805 21.187e-14