SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 152 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53245 No candidate annotation 258.8909 11.355e-11
P53375 N(6)-Monobutyryladenosine 337.1396 11.117e-12
P53391 NA 30851A 670.2612 11.708e-11
P53447 1,3,5-Hexatriene 80.0628 13.5e-12
P53450 Estradiol 17-O-Octadecanoate 538.4361 13.22e-13
P53455 Quadranoside X 650.4017 14.368e-12
P53480 Bengamide F 372.2267 11.122e-12
P53501 1-tridecanoyl-2-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-sn-glycerol 572.4396 11.413e-11
P53505 12,13-epoxy-10E,15Z-octadecadien-9-olide 292.2029 12.724e-20
P53515 1,2-Dimethyl-4-(6-methyl-4-heptenyl)-1,3-cyclohexadiene 218.1995 11.944e-11