Overview Annotation GWAS Evidence Associated genes

P53515

Metabolite ID
P53515
Deionized mass
218.1995 Da
Average m/z
219.2077
Average RT
30.0415
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)6.074e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)2.842e-11
Glyma.05G165200 hypothetical protein NA 1Chr05:35586701–35592272 (+)8.897e-11
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)8.897e-11
Glyma.05G166000 hypothetical protein NA 1Chr05:35657133–35657621 (-)8.897e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.944e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)4.749e-11