SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 134 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P45472 Gingerglycolipid C 680.3964 11.381e-11
P45564 No candidate annotation 571.8545 11.68e-13
P45575 1-[1-Butyl-2-oxo-4-[3-(pyridin-3-ylmethoxy)phenyl]-1,8-naphthyridin-3-yl]-3-[2,6-di(propan-2-yl)phenyl]urea 603.3330 14.753e-13
P45697 Cadalene 198.1396 18.993e-11
P45751 N-Acetyl-6-O-L-fucosyl-D-glucosamine 367.1494 11.677e-12
P45813 2'-O-acetyl-3-beta-O-D-xylopyranosyl-20,25-epoxy,9beta,19-cyclo-lanostan-3beta,6alpha,16beta,24alpha-tetrol 664.4151 11.622e-11
P45863 PGP(i-12:0/18:1(9Z)-O(12,13)) 786.4090 16.644e-12
P45883 Withanamide A 778.4209 18.833e-13
P45907 No candidate annotation 425.2680 15.999e-12
P45909 No candidate annotation 222.1575 12.04e-11