SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 121 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41299 PE(DiMe(9,3)/5-iso PGF2VI) 799.4652 19.286e-11
P41335 Manumycin A 550.2719 16.145e-11
P41353 Deoxyharringtonine 515.2462 17.476e-15
P41373 3-Benzoyloxy-6-oxo-12-ursen-28-oic acid 574.3653 19.954e-11
P41375 No candidate annotation 207.1309 11.584e-11
P41491 No candidate annotation 677.8221 13.356e-16
P41499 1-hexadecanoyl-2-(5-hydroxy-8-oxo-6E-octenoyl)-sn-glycero-3-phosphoethanolamine 607.3451 13.859e-11
P41501 Tuberactinomycin O 669.3316 18.018e-11
P41580 No candidate annotation 130.9653 16.495e-11
P41628 Cortolone-3-glucuronide 542.2743 15.867e-11