SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G057000

Description hypothetical protein

Gene interval Chr09:5140625–5145658 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features178Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records47

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2640.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

178 matching features · page 4 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31342 N-Methyl-N-nitroso-1H-purin-6-amine 178.0605 21.401e-12
P31991 Irroratin A 378.2030 29.295e-12
P33471 Thelephantin E 548.1401 23.855e-12
P34859 Fudosteine 179.0619 26.618e-12
P36333 Paniculidine B 233.1418 22.74e-11
P37857 Dymacrin D 438.3482 28.463e-12
P37908 Pubescenine 495.2859 27.621e-11
P40215 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5413 24.077e-11
P40626 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5541 21.676e-11
P43004 No candidate annotation 889.4915 21.162e-11