SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G056300

Description hypothetical protein

Gene interval Chr09:5059486–5068979 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features175Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0057.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

175 matching features · page 3 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06739 Pre-sodorifen diphosphate 396.1494 18.172e-11
P06792 Myo-inositol glutamate 323.0859 19.207e-11
P06840 13-Hydroxypalmatine 367.1410 15.83e-11
P06843 Leptanthin 286.0773 19.305e-11
P07122 p-Coumaroyl-malic acid 280.0568 16.247e-12
P07144 Diguanosine diphosphate 708.1155 15.622e-11
P07327 2-p-Tolyl-5,6,7,8-tetrahydrobenzo[d]imidazo[2,1-b]thiazole 268.1021 15.976e-11
P07338 Cedpht 304.1446 12.488e-12
P07827 No candidate annotation 809.2516 16.458e-11
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 15.2e-12