SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G054100

Description hypothetical protein

Gene interval Chr09:4780506–4788669 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features396Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0025.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

396 matching features · page 6 of 40

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08419 Niazicinin 369.1431 11.563e-12
P08444 (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate 155.0591 14.964e-11
P08490 Torokonine 449.2231 14.079e-11
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 12.71e-12
P08781 No candidate annotation 271.6171 12.592e-11
P08828 Thorectandramine 437.1702 13.946e-11
P09068 threo-Syringoylglycerol 244.0933 11.901e-13
P09334 1-(Pentafluorophenyl)propane 210.0481 15.265e-12
P09497 2,5-Dimethylfuran 96.0575 14.168e-12
P09624 No candidate annotation 475.1174 11.9e-11