SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G054100

Description hypothetical protein

Gene interval Chr09:4780506–4788669 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features396Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0025.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

396 matching features · page 39 of 40

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52079 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1493 12.942e-11
P52148 Ozanimod 404.1855 11.619e-12
P52659 Pyroglutamyl-glutamyl-proline amide 354.1541 13.335e-12
P52734 Bialaphos 323.1245 11.359e-12
P52806 Matteuorienate C 588.1799 15.852e-11
P52912 5,7,3',4'-Tetrahydroxyflavanone 7-alpha-L-arabinofuranosyl-(1->6)-glucoside 360.2187 13.936e-11
P52963 3,4,3',4'-Tetradehydro-psi,psi-caroten-16,16'-dial 560.3659 12.512e-11
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 11.894e-11
P53077 No candidate annotation 213.8814 12.699e-11
P53375 N(6)-Monobutyryladenosine 337.1396 11.191e-15