SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G054100

Description hypothetical protein

Gene interval Chr09:4780506–4788669 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features396Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0025.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

396 matching features · page 24 of 40

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30850 No candidate annotation 387.7083 14.807e-12
P30955 4,6,7-Trihydroxy-1,2,3,4-tetrahydroisoquinoline 181.0728 11.801e-11
P31267 1-Tert-butyl-3-(4-chlorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine 301.1109 19.172e-11
P31342 N-Methyl-N-nitroso-1H-purin-6-amine 178.0605 11.742e-12
P31421 Flumezapine 330.1305 13.241e-11
P31617 4-Hydroxyphenylacetylglutamic acid 281.0894 13.385e-12
P31729 3-((2'-(Benzoylaminosulfonyl)biphenyl-4-yl)methyl)-2-ethyl-5,7-dimethyl-3H-imidazo(4,5-b)pyridine 524.1860 12.463e-11
P31765 Desacylescin III 990.5033 15.669e-11
P31818 21-Deoxycortisol 346.2123 11.682e-11
P31826 TR-Saponin A 1008.5123 16.468e-12