SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G054100

Description hypothetical protein

Gene interval Chr09:4780506–4788669 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features396Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0025.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

396 matching features · page 11 of 40

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14911 5-Oxohexanoylcarnitine 273.1574 19.959e-11
P15044 Aglatenin 289.0811 14.253e-11
P15127 Quin-2 acetoxymethyl ester 829.2553 11.295e-11
P15192 Mycalolide A 908.4443 14.142e-11
P15275 Tulipalin A 98.0374 15.585e-11
P15393 No candidate annotation 826.0782 13.414e-11
P15465 Ripasudil 323.1081 12.538e-12
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 11.493e-12
P15527 (1S,4R)-passicapsin 417.1645 15.687e-14
P15566 1-(2,4,6-Trimethylphenoxy)propan-2-amine 193.1459 14.855e-13