SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 8 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08419 Niazicinin 369.1431 39.695e-14
P08444 (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate 155.0591 32.37e-14
P08500 Carpachromene dimethyl ether 364.1312 35.47e-11
P08622 Glutarimide 113.0473 32.247e-11
P08711 Xylogranatinin 192.0516 38.084e-11
P08723 (2R,3R,5R)-2-(S-Pantetheinyl)-carbapenam-3-carboxylate 431.1720 32.201e-11
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 31.462e-13
P08781 No candidate annotation 271.6171 31.343e-12
P08828 Thorectandramine 437.1702 34.186e-12
P09068 threo-Syringoylglycerol 244.0933 39.514e-19