SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 74 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P38880 No candidate annotation 104.0257 29.319e-11
P39415 2,2-Dimethyl-N-(2,4,6-trimethoxyphenyl)dodecanamide 393.2865 25.214e-11
P39419 Argentinic acid A 602.4104 21.738e-12
P39516 6,8-nonadienal 138.1027 27.763e-12
P40497 Cannabisin E 642.2624 23.928e-11
P40696 PA(8:0/10:0) 452.2512 28.175e-11
P40761 PGP(LTE4/16:1(9Z)) 983.4636 22.196e-11
P40783 Oxamicetin 634.2959 27.369e-11
P41379 11-Hydroxy-9-tridecenoic acid 228.1769 29.533e-11
P42115 Tarasaponin IV 1088.5304 25.054e-11