SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 3 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03443 Benzaldehyde 106.0408 31.597e-11
P03540 1-O-Galloylglycerol 244.0553 34.815e-11
P03976 Dilmapimod 456.1404 32.505e-12
P03988 No candidate annotation 189.0592 31.835e-11
P04147 Rubomycin F 599.2034 31.571e-13
P04213 5,6-Dihydroxy-7,8,4'-trimethoxyflavanone 346.1039 35.349e-11
P04440 8-Caffeoyl-3,4-dihydro-5,7-dihydroxy-4-phenylcoumarin 418.1053 31.341e-13
P04642 Aminoacylase 536.2172 33.289e-11
P04657 Isopongaflavone 334.1227 35.08e-14
P04784 Amorphigenin 410.1402 32.92e-11