SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 23 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20246 4-(Butylamino)benzoic acid 193.1120 33.245e-11
P20272 Aristoloterpenate II 527.1981 31.413e-11
P20323 Katsumadain A 476.1963 32.83e-14
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 32.299e-13
P20665 2-[(beta-D-glucopyranosyloxy)methyl]-5-hydroxymethylfuran 290.0985 31.862e-13
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 32.3e-11
P20828 Pimethixene 293.1245 31.492e-11
P20862 ES-242-4 578.2080 36.622e-13
P20889 Xyloglucan Heptasaccharide 1062.3370 35.545e-12
P20898 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1238 31.293e-12