SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 14 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13148 No candidate annotation 458.5730 31.04e-11
P13223 1,9Z,16-heptadecatrien-4,6-diyn-3,8-diol 258.1656 33.771e-13
P13249 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1229 31.621e-12
P13384 Humantenidine 342.1566 32.625e-11
P13391 1-(Indol-3-yl)propanol 3-phosphate 255.0623 31.597e-12
P13485 Pharacine 440.1444 36.043e-11
P13499 2-Aminoindan 133.0884 32.14e-12
P13624 OR-1896 245.1148 33.529e-11
P13688 4-Oxocyclohex-2-ene-1-carboxylate 140.0462 33.668e-12
P13744 Mutangin 636.2571 38.965e-16