SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G052700

Description hypothetical protein

Gene interval Chr09:4617652–4626364 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G31120:KUP10:K+ uptake permease 10

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features1463Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0021.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1463 matching features · page 88 of 147

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32742 4,4'-Diapo-psi,psi-Carotenedioic acid mono-beta-D-glucopyranosyl ester 622.3172 19.078e-13
P32780 Fraxiresinol 4'-O-beta-D-glucopyranoside 566.2025 17.254e-11
P32815 No candidate annotation 826.3427 17.365e-11
P32857 1-(9Z-octadecenoyl)-2-(5-oxo-valeroyl)-sn-glycero-3-phosphoserine 621.3358 15.746e-12
P32877 2-(4-(Methylamino)phenyl)benzo[d]thiazol-6-ol 256.0679 16.563e-14
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 19.486e-14
P32922 Sanggenon G 694.2471 12.418e-19
P32964 Bayogenin 488.3458 17.471e-11
P32967 LysoPI(20:0/0:0) 628.3553 11.105e-12
P32974 No candidate annotation 499.7155 15.312e-12