SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G019800

Alias VAMP721D

Description vesicle-associated membrane protein 721d

Gene interval Chr09:1540660–1547761 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features252Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

252 matching features · page 23 of 26

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P44090 Arenamide B 643.4002 11.616e-11
P44193 (+)-12alpha,28-Dihydroxy-3alpha-(3'-hydroxy-3'-methylglutaryloxy)-24-methyllanosta-8,24(31)-dien-26-oic acid 646.4036 19.27e-14
P44926 Eunicellin 522.2769 18.926e-11
P45137 Fluvirucin B4 603.4174 17.658e-11
P45212 Prucalopride 367.1677 14.542e-11
P45380 No candidate annotation 504.7622 17.837e-12
P45435 PE-NMe2(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) 863.5426 14.774e-11
P45759 Retapamulin 517.3287 12.933e-11
P45953 Antibiotic TAN 749B 339.2277 12.659e-11
P46207 Butanedioic acid, octenyl- 228.1364 14.591e-11